Package: GeoTox 1.0.0

Skylar Marvel

GeoTox: Spatiotemporal Mixture Risk Assessment

Connecting spatiotemporal exposure to individual and population-level risk via source-to-outcome continuum modeling. The package, methods, and case-studies are described in Messier, Reif, and Marvel (2025) <doi:10.1186/s40246-024-00711-8> and Eccles et al. (2023) <doi:10.1016/j.scitotenv.2022.158905>.

Authors:Skylar Marvel [aut, cre], David Reif [aut], Kyle Messier [aut], Spatiotemporal Exposures and Toxicology Group [cph]

GeoTox_1.0.0.tar.gz
GeoTox_1.0.0.zip(r-4.7)GeoTox_1.0.0.zip(r-4.6)GeoTox_1.0.0.zip(r-4.5)
GeoTox_1.0.0.tgz(r-4.6-any)GeoTox_1.0.0.tgz(r-4.5-any)
GeoTox_1.0.0.tar.gz(r-4.7-any)GeoTox_1.0.0.tar.gz(r-4.6-any)
GeoTox_1.0.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
GeoTox/json (API)
NEWS

# Install 'GeoTox' in R:
install.packages('GeoTox', repos = c('https://niehs.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/niehs/geotox/issues

Pkgdown/docs site:https://niehs.github.io

Datasets:

On CRAN:

Conda:

quarto

5.32 score 7 stars 4 scripts 518 downloads 30 exports 31 dependencies

Last updated from:5bc0628755. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK294
source / vignettesOK252
linux-release-x86_64OK246
macos-release-arm64OK324
macos-oldrel-arm64OK300
windows-develOK301
windows-releaseOK233
windows-oldrelOK316
wasm-releaseOK131

Exports:add_ageadd_exposureadd_exposure_rate_paramsadd_hill_paramsadd_obesitycalc_internal_dosecalc_invitro_concentrationcalc_responsecalc_riskcalc_sensitivityfit_hillGeoToxget_assay_tableget_boundaryget_conget_concentration_meanget_risk_quantilesget_risk_sensitivityget_risk_valuessample_simulated_csssensitivity_analysisset_boundaryset_fixed_cssset_sampleset_simulated_csssimulate_agesimulate_exposuresimulate_exposure_ratesimulate_obesitysimulate_population

Dependencies:blobcachemclicollectionscpp11DBIdbplyrdplyrduckdbduckplyrfastmapgenericsgluejsonlitelifecyclemagrittrmemoisepillarpkgconfigpurrrR6rlangstringistringrtibbletidyrtidyselecttruncnormutf8vctrswithr

GeoTox Package Data

Rendered frompackage_data.qmdusingquarto::htmlon May 19 2026.

Last update: 2026-05-19
Started: 2026-05-19